Some original stuff for the Z1 units and the Z2 ones that finished their story in Hakai-hen would've been nice. I was fine with most everything else. I kind of wish we had gotten Ozma back earlier too to see more Basara/Ozma antics as well.
GL ended at the perfect spot and it was handled in the manner that worked best to me.
@ stage 37 and still only 2 Macross F songs? Give me a break...
Macross 7 was handled awesomely, but no Holy Lonely Light.
No Pailsen Files BGM.
Some cut-ins have been changed for the sake of... changing (many have been around for 2 games now), many of them are worse now, that includes Garrod, Amuro, Kira, Athrun, (just to name a few). Sumeragi's is crap compared to Z2-1. This is the most disappointing aspect for me (cause it's the most frequently noticeable). And Lacus here has a very bad cut-in here, because 1 - she never smiles during battle and 2 - she has about the best cut-in on Z1 (http://www.youtube.com/watch?v=bgf_PS17XYk @ 2:50).