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If you do the quests in the Phantom storyline you get free canes, the main weapon for the Phantom. Also, at the end of the questline, you get the Alliance medal and Alliance Skill Buff. The buff increases attack damage. As for the Jetty I don't know because I didn't make on. Hope I helped :)
it should be noted that the ship's ability to travel anywhere is currently glitched, and you'll always wind up in Victoria Island when boarding and leaving the ship
so what you have to do is climb up the rope in the map you wind up at, and you'll reach the new entrance to the station to Orbis (don't use it anymore), climb up and you'll see the station to Ereve, which Phantom has no business going to (outside of the time you automatically get sent there in the last story quest), climb up and you'll find the station to Edelstein, go there
and for future reference, the fastest way to Orbis is boarding the ship to Edelstein and then going to Orbis from Edelstein
you still have to go to Orbis to get to Ludibrium, Ariant, and Leafre though, at least until they fix the bug with Phantom's ship, then as Phantom, you'll have quick access to all continents
everyone else still has to deal with the horrible continential travel though
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